STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39848.1Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
AKT39849.1
Uncharacterized protein.
 
     0.947
AKT43953.1
Uncharacterized protein.
 
     0.731
AKT36056.1
Uncharacterized protein.
  
     0.706
AKT37689.1
Uncharacterized protein.
  
     0.702
AKT40092.1
Uncharacterized protein.
  
     0.679
AKT37074.1
Uncharacterized protein.
  
     0.652
AKT39755.1
Uncharacterized protein.
  
     0.640
AKT36147.1
Outer membrane protein.
 
     0.634
AKT37934.1
Uncharacterized protein.
  
     0.634
AKT42697.1
Uncharacterized protein.
  
     0.634
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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