Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
atoB | atoB-2 | CMC5_000950 | CMC5_005520 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
atoB | atoB-3 | CMC5_000950 | CMC5_014900 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.917 |
atoB | atoB-4 | CMC5_000950 | CMC5_036180 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.924 |
atoB | atoB-5 | CMC5_000950 | CMC5_053370 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.900 |
atoB | atoB-6 | CMC5_000950 | CMC5_080140 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.920 |
atoB | fadE-9 | CMC5_000950 | CMC5_040120 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase. | 0.939 |
atoB | paaG-10 | CMC5_000950 | CMC5_059950 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.589 |
atoB | paaG-3 | CMC5_000950 | CMC5_006220 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.592 |
atoB | paaG-4 | CMC5_000950 | CMC5_019490 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.590 |
atoB | paaG-5 | CMC5_000950 | CMC5_022070 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.592 |
atoB-2 | atoB | CMC5_005520 | CMC5_000950 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
atoB-2 | atoB-3 | CMC5_005520 | CMC5_014900 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.908 |
atoB-2 | atoB-4 | CMC5_005520 | CMC5_036180 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.917 |
atoB-2 | atoB-5 | CMC5_005520 | CMC5_053370 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.900 |
atoB-2 | atoB-6 | CMC5_005520 | CMC5_080140 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.909 |
atoB-2 | fadE-9 | CMC5_005520 | CMC5_040120 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase. | 0.939 |
atoB-2 | paaG-10 | CMC5_005520 | CMC5_059950 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.589 |
atoB-2 | paaG-3 | CMC5_005520 | CMC5_006220 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.592 |
atoB-2 | paaG-4 | CMC5_005520 | CMC5_019490 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.590 |
atoB-2 | paaG-5 | CMC5_005520 | CMC5_022070 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.787 |
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