STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39862.1Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
ybdK
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.798
AKT40859.1
Uncharacterized protein.
 
     0.786
AKT43840.1
Uncharacterized protein.
  
  
 0.785
AKT40447.1
Glutathione synthase.
 
     0.784
AKT39551.1
ATPase.
 
     0.773
AKT36024.1
Uncharacterized protein.
 
     0.659
AKT39450.1
Uncharacterized protein.
  
     0.583
fadE-9
acyl-CoA dehydrogenase.
       0.568
AKT37461.1
Uncharacterized protein.
 
     0.536
AKT40766.1
Uncharacterized protein.
 
     0.536
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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