STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39871.1Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
AKT39872.1
Uncharacterized protein.
  
  
 0.703
AKT39870.1
Uncharacterized protein.
  
  
 0.649
AKT37522.1
Polysaccharide biosynthesis protein.
  
  
 0.641
AKT37588.1
UDP-galactose phosphate transferase.
  
  
 0.535
AKT37778.1
Sugar transferase.
  
  
 0.535
AKT37768.1
Outer membrane polysaccharide exporter.
  
  
 0.425
AKT43211.1
Uncharacterized protein.
  
  
 0.425
AKT37546.1
Capsular polysaccharide biosynthesis protein.
  
  
 0.416
AKT37769.1
Uncharacterized protein.
  
  
 0.414
AKT40970.1
Polysaccharide biosynthesis protein.
  
  
 0.414
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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