STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39883.1Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
AKT39814.1
Membrane protein.
 
  
 0.827
AKT38630.1
Uncharacterized protein.
 
  
 0.752
AKT43878.1
Surface antigen.
 
  
 0.737
AKT37393.1
Outer membrane protein.
 
  
 0.693
AKT40899.1
Uncharacterized protein.
 
  
 0.692
AKT43429.1
Uncharacterized protein.
    
 
 0.692
AKT36614.1
Uncharacterized protein.
 
  
 0.688
AKT43948.1
Uncharacterized protein.
  
  
 0.678
AKT40867.1
Uncharacterized protein.
  
    0.630
AKT38741.1
Membrane protein.
 
  
 0.617
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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