Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT39883.1Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
AKT39814.1
Membrane protein.
 
  
 0.837
AKT38630.1
Uncharacterized protein.
 
  
 0.767
AKT43878.1
Surface antigen.
 
  
 0.752
AKT40899.1
Uncharacterized protein.
 
  
 0.711
AKT37393.1
Outer membrane protein.
 
  
 0.710
AKT36614.1
Uncharacterized protein.
 
  
 0.704
AKT43429.1
Uncharacterized protein.
    
 
 0.694
AKT43948.1
Uncharacterized protein.
  
  
 0.639
AKT38741.1
Membrane protein.
 
  
 0.638
AKT40867.1
Uncharacterized protein.
  
    0.633
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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