STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT39928.1Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
AKT39906.1
3-hydroxy-3-methylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 0.998
mvaD
Diphosphomevalonate decarboxylase.
 
  
 0.991
mvaK2
Phosphomevalonate kinase.
 
  
  0.980
croE
3-hydroxy-3-methylglutaryl-ACP synthase.
 
  
 0.869
ispA
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
  
 0.865
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.830
AKT39926.1
Uncharacterized protein.
       0.603
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
  
 0.462
AKT37427.1
Uncharacterized protein.
  
     0.433
AKT43267.1
Uncharacterized protein.
  
     0.432
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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