STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40012.1Glycerol-3-phosphatase. (247 aa)    
Predicted Functional Partners:
AKT38398.1
Uncharacterized protein.
 
  
 0.608
dehII-6
Haloacid dehalogenase.
 
  
 0.541
AKT39845.1
MFS transporter.
 
     0.470
AKT41918.1
Multidrug MFS transporter; Belongs to the major facilitator superfamily.
  
  
 0.461
gph
Phosphoglycolate phosphatase.
 
  
 0.453
AKT42123.1
Transcriptional antiterminator.
     
 0.438
AKT36041.1
Sugar ABC transporter permease.
  
  
 0.431
malS-3
Alpha-amylase.
  
 0.428
malS-2
Alpha-amylase.
 
  
 0.405
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.