STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40092.1Uncharacterized protein. (842 aa)    
Predicted Functional Partners:
AKT41963.1
Uncharacterized protein.
 
 
0.957
AKT37542.1
TonB-dependent receptor.
 
 
 0.944
AKT40093.1
Uncharacterized protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.942
AKT40095.1
Uncharacterized protein.
 
 
 0.940
exbD-3
Biopolymer transporter ExbD.
 
 
 0.938
AKT38202.1
Ligand-gated channel protein.
 
 
0.929
AKT41625.1
Uncharacterized protein.
 
 
 
 0.793
AKT36056.1
Uncharacterized protein.
 
   
 0.769
AKT40888.1
Biopolymer transporter.
 
 
 0.745
motA-3
Flagellar motor protein MotA.
 
 
 0.743
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.