STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40171.1Outer membrane efflux protein. (541 aa)    
Predicted Functional Partners:
AKT43369.1
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.650
hlyD
Secretion protein HlyD.
 
 
 0.636
AKT38558.1
Hemolysin D.
 
 
 0.621
cyaB
Cyclolysin secretion/processing ATP-binding protein CyaB.
  
  
 0.607
AKT42425.1
ABC transporter ATP-binding protein.
  
  
 0.607
AKT42021.1
TonB-dependent receptor.
  
   
 0.594
AKT42348.1
Uncharacterized protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.574
AKT39422.1
TonB-dependent receptor.
  
   
 0.565
AKT40095.1
Uncharacterized protein.
  
   
 0.565
AKT40413.1
MFP transporter.
  
   
 0.564
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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