Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT37830.1 | AKT40203.1 | CMC5_019730 | CMC5_043560 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
AKT37830.1 | AKT41069.1 | CMC5_019730 | CMC5_052280 | Uncharacterized protein. | Anthranilate synthase subunit II. | 0.906 |
AKT37830.1 | AKT42223.1 | CMC5_019730 | CMC5_064460 | Uncharacterized protein. | Uncharacterized protein. | 0.909 |
AKT37830.1 | AKT42869.1 | CMC5_019730 | CMC5_070970 | Uncharacterized protein. | Uncharacterized protein. | 0.903 |
AKT37830.1 | aroC | CMC5_019730 | CMC5_030660 | Uncharacterized protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.904 |
AKT40027.1 | AKT40203.1 | CMC5_041800 | CMC5_043560 | Peptide synthetase. | Uncharacterized protein. | 0.886 |
AKT40027.1 | AKT42223.1 | CMC5_041800 | CMC5_064460 | Peptide synthetase. | Uncharacterized protein. | 0.518 |
AKT40027.1 | cmdD | CMC5_041800 | CMC5_047510 | Peptide synthetase. | Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine. | 0.979 |
AKT40027.1 | croK | CMC5_041800 | CMC5_030100 | Peptide synthetase. | Uncharacterized protein. | 0.977 |
AKT40203.1 | AKT37830.1 | CMC5_043560 | CMC5_019730 | Uncharacterized protein. | Uncharacterized protein. | 0.900 |
AKT40203.1 | AKT40027.1 | CMC5_043560 | CMC5_041800 | Uncharacterized protein. | Peptide synthetase. | 0.886 |
AKT40203.1 | AKT41069.1 | CMC5_043560 | CMC5_052280 | Uncharacterized protein. | Anthranilate synthase subunit II. | 0.951 |
AKT40203.1 | AKT42223.1 | CMC5_043560 | CMC5_064460 | Uncharacterized protein. | Uncharacterized protein. | 0.943 |
AKT40203.1 | AKT42869.1 | CMC5_043560 | CMC5_070970 | Uncharacterized protein. | Uncharacterized protein. | 0.970 |
AKT40203.1 | aroC | CMC5_043560 | CMC5_030660 | Uncharacterized protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.952 |
AKT40203.1 | cmdD | CMC5_043560 | CMC5_047510 | Uncharacterized protein. | Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine. | 0.885 |
AKT40203.1 | croK | CMC5_043560 | CMC5_030100 | Uncharacterized protein. | Uncharacterized protein. | 0.956 |
AKT40203.1 | menA | CMC5_043560 | CMC5_043580 | Uncharacterized protein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.935 |
AKT40203.1 | menD | CMC5_043560 | CMC5_043570 | Uncharacterized protein. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.998 |
AKT41069.1 | AKT37830.1 | CMC5_052280 | CMC5_019730 | Anthranilate synthase subunit II. | Uncharacterized protein. | 0.906 |
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