Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKT40215.1Aspartate aminotransferase. (436 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase.
 
  
 0.920
dapD
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
  
 
 0.914
argD
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
    
 0.912
AKT40216.1
Uncharacterized protein.
       0.709
AKT40165.1
Uncharacterized protein.
  
     0.639
AKT37626.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.600
AKT38343.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.600
AKT41940.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 0.600
AKT40884.1
Uncharacterized protein.
    
 0.563
pilZ
Pilus assembly protein PilZ.
  
     0.510
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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