STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40252.1Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
AKT40253.1
Uncharacterized protein.
       0.773
AKT40254.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.773
AKT43728.1
Uncharacterized protein.
  
     0.772
AKT38758.1
Uncharacterized protein.
  
     0.762
AKT38439.1
Uncharacterized protein.
  
     0.757
AKT42145.1
Uncharacterized protein.
  
     0.743
AKT42635.1
Uncharacterized protein.
  
     0.739
AKT42516.1
Uncharacterized protein.
  
     0.737
AKT37114.1
Uncharacterized protein.
  
     0.706
AKT38425.1
Uncharacterized protein.
  
     0.705
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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