STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40260.1Sodium/hydrogen exchanger family protein. (455 aa)    
Predicted Functional Partners:
AKT40258.1
Kef family potassium-efflux system protein.
 
     0.950
AKT40257.1
Uncharacterized protein.
 
   
 0.836
AKT40259.1
Sodium/hydrogen exchanger family protein.
 
    
0.776
AKT42123.1
Transcriptional antiterminator.
 
    
 0.593
AKT43360.1
Histidine kinase.
 
     0.551
AKT40256.1
Uncharacterized protein.
       0.508
AKT43342.1
Uncharacterized protein.
 
   
 0.459
AKT37412.1
Uncharacterized protein.
  
    0.440
AKT40270.1
Uncharacterized protein.
  
     0.426
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.