Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40265.1Uncharacterized protein. (516 aa)    
Predicted Functional Partners:
AKT40266.1
Uncharacterized protein.
       0.596
AKT37482.1
Uncharacterized protein.
  
     0.521
AKT43175.1
Uncharacterized protein.
 
    0.473
AKT40270.1
Uncharacterized protein.
 
    0.461
AKT40264.1
Uncharacterized protein.
       0.454
AKT40731.1
Uncharacterized protein.
  
     0.450
AKT40730.1
Uncharacterized protein.
  
     0.445
AKT40268.1
Keratin associated protein 5-1.
  
    0.419
AKT43798.1
Uncharacterized protein.
  
     0.417
AKT39822.1
Uncharacterized protein.
 
     0.415
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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