STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40283.1Alpha amylase; Belongs to the glycosyl hydrolase 13 family. (725 aa)    
Predicted Functional Partners:
AKT36041.1
Sugar ABC transporter permease.
 
  
 0.861
AKT40284.1
Uncharacterized protein; Belongs to the glycosyl hydrolase 13 family.
 
    
0.830
AKT38391.1
Oxidoreductase.
  
   
 0.650
malS-2
Alpha-amylase.
 
 
0.626
AKT38116.1
Oxidoreductase.
  
   
 0.605
AKT42572.1
Uncharacterized protein.
  
     0.590
AKT36044.1
Uncharacterized protein.
 
   
 0.564
AKT40285.1
Uncharacterized protein.
   
 
 0.561
AKT36040.1
ABC transporter permease.
 
  
 0.560
AKT36402.1
Uncharacterized protein.
  
     0.558
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.