Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40292.1Transcriptional regulator. (222 aa)    
Predicted Functional Partners:
AKT40291.1
Histidine kinase.
 
   0.952
AKT44101.1
Uncharacterized protein.
 
 
 0.828
AKT39417.1
Histidine kinase.
 
 
 0.803
AKT38766.1
Uncharacterized protein.
 
 
 0.792
AKT39629.1
Uncharacterized protein.
  
   0.787
AKT39078.1
Uncharacterized protein.
 
 
 0.786
AKT42701.1
Uncharacterized protein.
 
 
 0.775
AKT36327.1
Uncharacterized protein.
  
 
   0.773
AKT39753.1
Sensor kinase.
 
 
 0.773
AKT39671.1
Histidine kinase.
 
 
 0.771
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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