Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40306.1Exonuclease. (188 aa)    
Predicted Functional Partners:
AKT40307.1
Uncharacterized protein.
       0.752
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
 
 
 0.627
AKT38295.1
Uncharacterized protein.
  
     0.619
AKT37189.1
Uncharacterized protein.
  
     0.549
AKT37563.1
Hydrolase.
  
     0.539
AKT42498.1
Uncharacterized protein.
  
     0.530
AKT41327.1
RNA-binding protein.
  
     0.499
mvaD
Diphosphomevalonate decarboxylase.
    
   0.496
AKT40305.1
Uncharacterized protein.
       0.494
AKT43268.1
Uncharacterized protein.
  
     0.431
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: medium (60%) [HD]