Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKT40311.1ABC transporter ATP-binding protein. (225 aa)    
Predicted Functional Partners:
AKT43372.1
Multidrug ABC transporter substrate-binding protein.
 
 0.965
AKT43371.1
Multidrug ABC transporter substrate-binding protein.
 
 0.964
AKT39235.1
Multidrug ABC transporter substrate-binding protein.
 
 0.963
AKT44121.1
Multidrug ABC transporter substrate-binding protein.
 
 0.963
AKT40312.1
Uncharacterized protein.
 
 
 0.905
AKT37567.1
Uncharacterized protein.
 
 
 0.778
AKT40310.1
Uncharacterized protein.
       0.773
AKT42162.1
Uncharacterized protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.770
AKT38037.1
ABC transporter permease.
  
 
 0.681
AKT42338.1
Uncharacterized protein.
  
 
 0.681
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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