STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40311.1ABC transporter ATP-binding protein. (225 aa)    
Predicted Functional Partners:
AKT43372.1
Multidrug ABC transporter substrate-binding protein.
 
 0.970
AKT43371.1
Multidrug ABC transporter substrate-binding protein.
 
 0.969
AKT39235.1
Multidrug ABC transporter substrate-binding protein.
 
 0.968
AKT44121.1
Multidrug ABC transporter substrate-binding protein.
 
 0.968
AKT40312.1
Uncharacterized protein.
 
 
 0.910
AKT42162.1
Uncharacterized protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.828
AKT37567.1
Uncharacterized protein.
 
 
 0.778
AKT40310.1
Uncharacterized protein.
       0.773
AKT38037.1
ABC transporter permease.
 
 
 0.682
AKT42338.1
Uncharacterized protein.
 
 
 0.682
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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