Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40322.1Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
AKT40321.1
Uncharacterized protein.
       0.773
AKT37928.1
Uncharacterized protein.
  
 
   0.761
AKT38947.1
Uncharacterized protein.
 
     0.749
AKT41002.1
Uncharacterized protein.
  
    0.709
AKT42745.1
Uncharacterized protein.
  
     0.689
AKT43342.1
Uncharacterized protein.
  
    0.681
AKT41347.1
Uncharacterized protein.
  
     0.673
AKT41001.1
Uncharacterized protein.
  
    0.669
AKT36046.1
Uncharacterized protein.
  
     0.665
AKT37757.1
Uncharacterized protein.
  
     0.661
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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