STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40324.1Oxidoreductase. (434 aa)    
Predicted Functional Partners:
AKT40325.1
RNA polymerase sigma24 factor; Belongs to the sigma-70 factor family.
    
 0.781
AKT39477.1
Ferredoxin reductase.
 
  
 0.611
gpmA-2
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
   0.591
AKT42111.1
Pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.567
tetR-12
TetR family transcriptional regulator.
  
     0.550
AKT43368.1
Peptidyl-prolyl cis-trans isomerase.
  
    0.538
AKT43540.1
Oxidoreductase.
  
  
 0.474
AKT37670.1
Cation:proton antiporter.
  
  
 0.464
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
   
 
 0.447
aceK
Isocitrate dehydrogenase.
   
  
 0.439
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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