STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40340.1Uncharacterized protein. (221 aa)    
Predicted Functional Partners:
AKT36799.1
Histidine kinase.
 
 
 0.903
AKT37460.1
Diguanylate cyclase.
 
 
 0.866
AKT36039.1
Uncharacterized protein.
 
 
 0.848
AKT40535.1
Uncharacterized protein.
  
 
 0.724
AKT41419.1
Uncharacterized protein.
  
 
 0.712
AKT40106.1
Uncharacterized protein.
  
 
 0.667
AKT40339.1
Uncharacterized protein.
 
    
0.660
AKT39985.1
Uncharacterized protein.
  
 
 0.630
AKT36566.1
Histidine kinase.
  
 
 0.608
arsR-7
ArsR family transcriptional regulator.
  
 
 0.602
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.