STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40347.1Porin. (605 aa)    
Predicted Functional Partners:
AKT37424.1
Uncharacterized protein.
  
 
 0.744
AKT42996.1
Membrane protein.
  
 
 0.727
AKT41676.1
Membrane protein.
  
 
 0.708
AKT42280.1
Membrane protein.
  
 
 0.686
AKT40348.1
Uncharacterized protein.
 
 
  
0.659
AKT37966.1
ompA-family exported protein.
  
     0.550
AKT43509.1
ompA-family exported protein.
  
     0.533
AKT43505.1
tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.526
hsdR
Type I deoxyribonuclease HsdR.
  
    0.479
hsdR-3
Type I deoxyribonuclease HsdR.
  
    0.477
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.