AKT40348.1 protein (Chondromyces crocatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AKT40348.1

Uncharacterized protein. (1227 aa)

Predicted Functional Partners:

AKT40347.1

0.659

AKT43826.1

0.572

AKT39091.1

0.566

AKT43347.1

0.555

AKT41842.1

0.543

AKT38590.1

0.534

AKT40614.1

0.534

AKT40349.1

0.528

AKT37237.1

0.526

AKT39622.1

0.509

Your Current Organism:

Chondromyces crocatus

NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT37237.1	AKT39622.1	CMC5_013680	CMC5_037710	Uncharacterized protein.	Uncharacterized protein.	0.504
AKT37237.1	AKT40348.1	CMC5_013680	CMC5_045010	Uncharacterized protein.	Uncharacterized protein.	0.526
AKT38590.1	AKT39622.1	CMC5_027370	CMC5_037710	Uncharacterized protein.	Uncharacterized protein.	0.484
AKT38590.1	AKT40348.1	CMC5_027370	CMC5_045010	Uncharacterized protein.	Uncharacterized protein.	0.534
AKT38590.1	AKT40614.1	CMC5_027370	CMC5_047700	Uncharacterized protein.	Uncharacterized protein.	0.760
AKT38590.1	AKT41842.1	CMC5_027370	CMC5_060530	Uncharacterized protein.	Uncharacterized protein.	0.768
AKT38590.1	AKT43347.1	CMC5_027370	CMC5_075790	Uncharacterized protein.	Uncharacterized protein.	0.764
AKT38590.1	AKT43826.1	CMC5_027370	CMC5_080630	Uncharacterized protein.	Uncharacterized protein.	0.742
AKT39091.1	AKT40348.1	CMC5_032380	CMC5_045010	Uncharacterized protein.	Uncharacterized protein.	0.566
AKT39091.1	AKT41842.1	CMC5_032380	CMC5_060530	Uncharacterized protein.	Uncharacterized protein.	0.449
AKT39622.1	AKT37237.1	CMC5_037710	CMC5_013680	Uncharacterized protein.	Uncharacterized protein.	0.504
AKT39622.1	AKT38590.1	CMC5_037710	CMC5_027370	Uncharacterized protein.	Uncharacterized protein.	0.484
AKT39622.1	AKT40348.1	CMC5_037710	CMC5_045010	Uncharacterized protein.	Uncharacterized protein.	0.509
AKT39622.1	AKT41842.1	CMC5_037710	CMC5_060530	Uncharacterized protein.	Uncharacterized protein.	0.423
AKT40347.1	AKT40348.1	CMC5_045000	CMC5_045010	Porin.	Uncharacterized protein.	0.659
AKT40347.1	AKT40349.1	CMC5_045000	CMC5_045020	Porin.	Uncharacterized protein.	0.409
AKT40348.1	AKT37237.1	CMC5_045010	CMC5_013680	Uncharacterized protein.	Uncharacterized protein.	0.526
AKT40348.1	AKT38590.1	CMC5_045010	CMC5_027370	Uncharacterized protein.	Uncharacterized protein.	0.534
AKT40348.1	AKT39091.1	CMC5_045010	CMC5_032380	Uncharacterized protein.	Uncharacterized protein.	0.566
AKT40348.1	AKT39622.1	CMC5_045010	CMC5_037710	Uncharacterized protein.	Uncharacterized protein.	0.509