Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40374.1Uncharacterized protein. (1113 aa)    
Predicted Functional Partners:
AKT39323.1
Phosphohydrolase.
  
     0.758
AKT36162.1
Uncharacterized protein.
  
     0.729
AKT42404.1
Uncharacterized protein.
  
     0.712
AKT39117.1
Uncharacterized protein.
  
     0.512
AKT39620.1
Uncharacterized protein.
  
     0.496
AKT38824.1
Uncharacterized protein.
  
    0.473
AKT42520.1
Uncharacterized protein.
  
     0.458
AKT42555.1
Uncharacterized protein.
  
     0.452
AKT40492.1
Uncharacterized protein.
  
    0.450
AKT39997.1
WD repeat-containing protein.
  
    0.447
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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