STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40383.1Uncharacterized protein. (382 aa)    
Predicted Functional Partners:
AKT38854.1
Uncharacterized protein.
  
 
 0.798
AKT40386.1
Uncharacterized protein.
  
  
 0.772
cndA
Uncharacterized protein.
  
 
 0.764
AKT41319.1
Uncharacterized protein.
  
 
 0.722
ajuL
Uncharacterized protein.
  
 
 0.717
croB
Polyketide synthase.
  
 
 0.697
AKT40382.1
Uncharacterized protein.
       0.693
tugA
Uncharacterized protein.
  
 
 0.674
croI
Uncharacterized protein.
  
 
 0.668
acpS
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
  
 0.647
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.