STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40410.1Polysaccharide deacetylase. (309 aa)    
Predicted Functional Partners:
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.776
AKT39958.1
Uncharacterized protein.
 
    0.747
AKT40506.1
Uncharacterized protein.
 
    0.746
AKT35903.1
Uncharacterized protein.
 
    0.731
AKT41634.1
Uncharacterized protein.
  
     0.610
nudF
ADP-ribose pyrophosphatase.
 
     0.596
gspL
General secretion pathway protein GspL.
  
     0.588
AKT36711.1
Uncharacterized protein.
  
     0.588
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.573
AKT43995.1
Uncharacterized protein.
  
     0.568
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.