Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40419.1Sulfate transporter. (138 aa)    
Predicted Functional Partners:
AKT40420.1
Uncharacterized protein.
 
 
 0.935
AKT40421.1
Uncharacterized protein.
 
   0.928
AKT40823.1
Protein kinase.
 
 
 0.889
AKT40822.1
Uncharacterized protein.
 
   0.855
AKT40418.1
Uncharacterized protein.
 
    
0.830
AKT42181.1
Uncharacterized protein.
 
 
 
 0.826
AKT36354.1
Anti-anti sigma factor protein.
 
 
 
 0.822
AKT37108.1
Uncharacterized protein.
 
 
 
 0.821
AKT37492.1
Anti-anti sigma factor protein.
 
 
 
 0.821
rsbV
Anti-anti-sigma factor.
 
 
 
 0.821
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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