Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40474.1Organic solvent ABC transporter ATP-binding protein. (246 aa)    
Predicted Functional Partners:
AKT40226.1
Uncharacterized protein.
 
 0.997
AKT36391.1
ABC transporter permease.
 0.987
AKT38061.1
ABC transporter permease.
 0.985
AKT40472.1
ABC transporter permease.
 
 0.984
AKT40473.1
ABC transporter permease.
 
 0.984
AKT40475.1
Uncharacterized protein.
 
 
 0.928
AKT38346.1
Uncharacterized protein.
  
 
 0.850
AKT43996.1
ABC organic solvent transporter solute-binding substrate-binding protein.
 
 
 0.810
AKT41703.1
ABC transporter substrate-binding protein.
 
 
 0.703
oppB-3
Peptide ABC transporter permease.
 
      0.529
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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