STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
merR-6MerR family transcriptional regulator. (331 aa)    
Predicted Functional Partners:
AKT40679.1
Uncharacterized protein.
  
     0.750
AKT42377.1
Uncharacterized protein.
 
 
   0.730
AKT41626.1
Uncharacterized protein.
  
     0.718
AKT38054.1
Uncharacterized protein.
 
     0.717
AKT37100.1
Uncharacterized protein.
  
     0.702
AKT43217.1
Uncharacterized protein.
 
   
 0.616
AKT40501.1
Uncharacterized protein.
       0.576
AKT40939.1
Protein kinase.
 
    0.560
AKT39625.1
Uncharacterized protein.
 
   
 0.546
AKT43949.1
Uncharacterized protein.
  
     0.544
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.