Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40557.1Uncharacterized protein. (419 aa)    
Predicted Functional Partners:
ethA
FAD-containing monooxygenase EthA.
 
     0.736
AKT38615.1
Uncharacterized protein.
  
     0.585
AKT40523.1
Uncharacterized protein.
  
     0.580
tetR-5
TetR family transcriptional regulator.
  
     0.522
AKT37659.1
Metallophosphoesterase.
  
     0.506
AKT42551.1
Uncharacterized protein.
  
     0.473
AKT39227.1
GMC oxidoreductase.
  
     0.450
AKT39668.1
Uncharacterized protein.
  
     0.403
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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