Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40565.1Uncharacterized protein. (532 aa)    
Predicted Functional Partners:
AKT41376.1
tonB family protein.
  
     0.741
AKT36822.1
Uncharacterized protein.
  
     0.678
AKT37540.1
Fatty acid desaturase.
  
     0.674
AKT40567.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
   
   0.651
AKT40566.1
Uncharacterized protein.
       0.637
AKT36750.1
Uncharacterized protein.
  
     0.628
capB
Capsule biosynthesis protein CapB.
  
     0.619
AKT37070.1
Uncharacterized protein.
  
     0.610
AKT40467.1
Uncharacterized protein.
  
     0.580
AKT42697.1
Uncharacterized protein.
  
     0.562
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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