Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40582.1Uncharacterized protein. (1500 aa)    
Predicted Functional Partners:
AKT37792.1
Uncharacterized protein.
  
     0.613
dehII-8
Haloacid dehalogenase.
  
 
   0.584
AKT40583.1
Uncharacterized protein.
 
    
0.563
dehII-7
Haloacid dehalogenase.
  
 
   0.535
AKT43110.1
Peptidase S1.
  
 
   0.529
AKT42648.1
Protein phosphatase.
   
  0.512
AKT40861.1
Uncharacterized protein.
  
 0.498
AKT41252.1
Uncharacterized protein.
  
 0.485
rpmD
50S ribosomal protein L30.
   
  0.479
AKT44073.1
Uncharacterized protein.
  
     0.478
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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