STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
hutH-2Histidine ammonia-lyase; Has aminomutase and, to a lesser extent, ammonia-lyase activity. Primarily, catalyzes the rearrangement of L-tyrosine to R- beta-tyrosine, which is incorporated into secondary metabolites called chondramides. The aminomutase activity mainly produces R-beta-tyrosine but also S-beta tyrosine in smaller amounts. Does not accept D- tyrosine, L-histidine or L-phenylalanine as substrates. (531 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 0.955
hutI
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.947
AKT44181.1
Uncharacterized protein.
  
  
 0.765
AKT41685.1
Amidohydrolase.
  
  
 0.760
AKT40592.1
Uncharacterized protein.
       0.718
rocF
Arginase; Belongs to the arginase family.
  
  
 0.597
speB
Agmatinase; Belongs to the arginase family.
  
  
 0.597
AKT42424.1
Uncharacterized protein; Belongs to the arginase family.
  
  
 0.597
rocF-2
Arginase; Belongs to the arginase family.
  
  
 0.595
cmdE
Halogenase; Involved in the incorporation of a chlorinated tryptophan residue into halogenated forms of the secondary metabolites called chondramides.
 
     0.579
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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