STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmdEHalogenase; Involved in the incorporation of a chlorinated tryptophan residue into halogenated forms of the secondary metabolites called chondramides. (522 aa)    
Predicted Functional Partners:
AKT38389.1
Electron-transferring-flavoprotein dehydrogenase.
  
     0.770
acpP-6
Acyl carrier protein.
 
    0.762
AKT39111.1
Uncharacterized protein.
  
   
 0.741
AKT38621.1
Uncharacterized protein.
  
     0.685
cmdD
Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine.
     
 0.655
AKT37230.1
Uncharacterized protein.
 
     0.619
AKT40053.1
Uncharacterized protein.
  
     0.610
AKT39832.1
Uncharacterized protein.
  
     0.589
hutH-2
Histidine ammonia-lyase; Has aminomutase and, to a lesser extent, ammonia-lyase activity. Primarily, catalyzes the rearrangement of L-tyrosine to R- beta-tyrosine, which is incorporated into secondary metabolites called chondramides. The aminomutase activity mainly produces R-beta-tyrosine but also S-beta tyrosine in smaller amounts. Does not accept D- tyrosine, L-histidine or L-phenylalanine as substrates.
 
     0.580
AKT36470.1
Monooxygenase.
  
     0.571
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.