Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40622.1Uncharacterized protein. (724 aa)    
Predicted Functional Partners:
AKT43709.1
Type VI secretion protein.
 
    0.781
AKT40384.1
Uncharacterized protein.
 
    0.780
AKT40633.1
Type VI secretion protein.
 
    0.780
AKT41278.1
Type VI secretion protein.
 
    0.780
AKT42453.1
Type VI secretion protein.
 
    0.778
AKT41267.1
Uncharacterized protein.
  
     0.775
AKT36335.1
Uncharacterized protein.
  
     0.774
AKT40612.1
Uncharacterized protein.
  
     0.774
AKT38901.1
Uncharacterized protein.
 
    0.756
AKT38891.1
Uncharacterized protein.
 
    0.753
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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