Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cheY-10Chemotaxis protein CheY. (144 aa)    
Predicted Functional Partners:
cheY-14
Chemotaxis protein CheY.
  
 
 
 0.781
AKT42972.1
Uncharacterized protein.
 
 
 
 0.778
cheY-17
Chemotaxis protein CheY.
  
 
   0.777
cheY-8
Chemotaxis protein CheY.
  
 
   0.776
AKT43242.1
Uncharacterized protein.
  
 
   0.776
AKT43438.1
Uncharacterized protein.
  
 
   0.775
AKT39779.1
Histidine kinase.
 
 
 0.774
AKT43954.1
Transcriptional regulator.
  
 
   0.774
AKT39629.1
Uncharacterized protein.
  
 
   0.772
AKT35901.1
Transcriptional regulator.
  
     0.771
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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