Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
parBChromosome partitioning protein ParB; Belongs to the ParB family. (299 aa)    
Predicted Functional Partners:
AKT40677.1
Uncharacterized protein.
 
 0.998
parB-2
Chromosome partitioning protein.
 
 0.952
AKT40670.1
Uncharacterized protein.
 
 0.948
AKT36382.1
ATPase.
 
 
 0.944
rsmG
Uncharacterized protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.809
AKT36598.1
Uncharacterized protein.
  
  
 0.792
AKT43245.1
Uncharacterized protein.
  
 
 0.765
AKT42904.1
Uncharacterized protein.
  
  
 0.750
int
Integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
  
 0.589
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
  
 0.584
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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