STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysM-6Cysteine synthase. (382 aa)    
Predicted Functional Partners:
ocd
Ornithine cyclodeaminase.
 
 
 0.934
AKT39123.1
Serine acetyltransferase.
 
 0.891
AKT42742.1
Acetyltransferase.
 
 0.876
cysN
Adenylylsulfate kinase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.829
AKT37508.1
Transferase.
  
 0.811
metB
Cystathionine gamma-synthase.
 
 0.715
metB-2
Cystathionine gamma-synthase.
 
 0.697
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.626
cysC
Uncharacterized protein; Catalyzes the synthesis of activated sulfate.
  
  
 0.530
AKT43632.1
Glutamate synthase.
     
 0.490
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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