Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40699.1Polyketide synthase. (1794 aa)    
Predicted Functional Partners:
cndA
Uncharacterized protein.
 
0.986
AKT41199.1
Peptide synthetase.
 0.979
cndF
Amino acid adenylation domain-containing protein.
 
 
 0.976
AKT38867.1
Beta-ketoacyl synthase.
 0.973
AKT38854.1
Uncharacterized protein.
 
0.969
prpE-4
acyl-CoA synthetase.
 
 0.964
prpE-5
acyl-CoA synthetase.
 
 0.962
AKT35904.1
Peptide synthetase.
  
 0.956
AKT36657.1
Uncharacterized protein.
 0.956
AKT40132.1
Nonribosomal peptide synthase.
 
 
 0.955
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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