Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40700.1Polyketide synthase. (1910 aa)    
Predicted Functional Partners:
cndA
Uncharacterized protein.
  
 0.982
AKT41199.1
Peptide synthetase.
 0.971
AKT38854.1
Uncharacterized protein.
 
0.967
cndF
Amino acid adenylation domain-containing protein.
 
 
 0.967
AKT35904.1
Peptide synthetase.
  
 0.956
croK
Uncharacterized protein.
 
 
 0.954
AKT41192.1
Uncharacterized protein.
 
 
 0.949
tugA
Uncharacterized protein.
 
 
0.948
AKT40132.1
Nonribosomal peptide synthase.
 
 
 0.941
AKT41319.1
Uncharacterized protein.
 
0.930
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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