Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40709.1Anti-anti sigma factor protein. (391 aa)    
Predicted Functional Partners:
AKT40420.1
Uncharacterized protein.
 
 
 0.881
AKT40823.1
Protein kinase.
 
 
 0.881
AKT40421.1
Uncharacterized protein.
 
   0.874
AKT40822.1
Uncharacterized protein.
 
   0.848
AKT40419.1
Sulfate transporter.
 
 
 
 0.821
AKT40821.1
Uncharacterized protein.
 
 
 
 0.821
AKT36799.1
Histidine kinase.
  
  
 0.574
AKT37771.1
Uncharacterized protein.
  
   0.524
AKT36038.1
Transcriptional regulator.
  
 
 0.522
AKT36039.1
Uncharacterized protein.
  
  
 0.509
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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