STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlpALipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (148 aa)    
Predicted Functional Partners:
AKT40714.1
Uncharacterized protein.
       0.773
AKT40715.1
Uncharacterized protein.
       0.546
AKT37419.1
Protein kinase.
  
 
 0.490
AKT36614.1
Uncharacterized protein.
  
 
 0.482
mltC-3
Murein transglycosylase.
     
 0.476
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
   
 
 0.459
AKT37879.1
Uncharacterized protein.
   
 
 0.453
AKT38452.1
Exported transglycosylase.
   
 
 0.453
AKT37162.1
Uncharacterized protein.
  
 
 0.436
AKT42836.1
Uncharacterized protein.
  
 
 0.436
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.