Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40719.1Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
AKT37847.1
Uncharacterized protein.
  
     0.748
cndA
Uncharacterized protein.
  
 0.738
AKT36744.1
Uncharacterized protein.
  
     0.726
AKT36800.1
Sigma factor sigB regulation protein rsbQ.
  
     0.717
AKT41733.1
Arylesterase.
  
     0.681
tugA
Uncharacterized protein.
  
 0.570
AKT38854.1
Uncharacterized protein.
  
 0.564
ajuC
Polyketide synthase.
  
 0.524
ajuE
Polyketide synthase.
  
 0.524
AKT37927.1
Alpha/beta hydrolase.
  
     0.433
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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