STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40757.1Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
argS-2
arginyl-tRNA synthetase.
     
 0.789
AKT41634.1
Uncharacterized protein.
 
   
 0.753
AKT41689.1
Uncharacterized protein.
 
     0.745
AKT38058.1
Uncharacterized protein.
 
     0.727
AKT39666.1
Phosphopeptide-binding protein.
 
     0.725
AKT43995.1
Uncharacterized protein.
  
     0.721
AKT44191.1
Uncharacterized protein.
 
     0.721
AKT36098.1
Uncharacterized protein.
 
     0.720
AKT41655.1
Uncharacterized protein.
 
     0.716
AKT42745.1
Uncharacterized protein.
 
     0.712
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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