STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40814.1Saccharopine dehydrogenase. (388 aa)    
Predicted Functional Partners:
AKT40815.1
Uncharacterized protein; Belongs to the amidase family.
  
    0.787
mutS-4
DNA mismatch repair protein MutS.
       0.773
ethA
FAD-containing monooxygenase EthA.
  
   
 0.696
AKT40401.1
Strictosidine synthase.
  
     0.692
AKT36398.1
Dehydrogenase.
  
     0.592
AKT41383.1
Hydrolase.
 
     0.592
AKT38927.1
Uncharacterized protein.
  
     0.584
AKT41063.1
NAD-dependent dehydratase.
  
     0.584
AKT40817.1
Uncharacterized protein.
       0.572
AKT43828.1
Uncharacterized protein.
  
     0.545
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (8%) [HD]