Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT36398.1 | AKT38927.1 | CMC5_005110 | CMC5_030740 | Dehydrogenase. | Uncharacterized protein. | 0.507 |
AKT36398.1 | AKT40401.1 | CMC5_005110 | CMC5_045540 | Dehydrogenase. | Strictosidine synthase. | 0.533 |
AKT36398.1 | AKT40814.1 | CMC5_005110 | CMC5_049700 | Dehydrogenase. | Saccharopine dehydrogenase. | 0.592 |
AKT36398.1 | AKT43828.1 | CMC5_005110 | CMC5_080650 | Dehydrogenase. | Uncharacterized protein. | 0.507 |
AKT38927.1 | AKT36398.1 | CMC5_030740 | CMC5_005110 | Uncharacterized protein. | Dehydrogenase. | 0.507 |
AKT38927.1 | AKT40401.1 | CMC5_030740 | CMC5_045540 | Uncharacterized protein. | Strictosidine synthase. | 0.594 |
AKT38927.1 | AKT40814.1 | CMC5_030740 | CMC5_049700 | Uncharacterized protein. | Saccharopine dehydrogenase. | 0.584 |
AKT38927.1 | ethA | CMC5_030740 | CMC5_047140 | Uncharacterized protein. | FAD-containing monooxygenase EthA. | 0.637 |
AKT40401.1 | AKT36398.1 | CMC5_045540 | CMC5_005110 | Strictosidine synthase. | Dehydrogenase. | 0.533 |
AKT40401.1 | AKT38927.1 | CMC5_045540 | CMC5_030740 | Strictosidine synthase. | Uncharacterized protein. | 0.594 |
AKT40401.1 | AKT40814.1 | CMC5_045540 | CMC5_049700 | Strictosidine synthase. | Saccharopine dehydrogenase. | 0.692 |
AKT40401.1 | AKT43828.1 | CMC5_045540 | CMC5_080650 | Strictosidine synthase. | Uncharacterized protein. | 0.566 |
AKT40401.1 | ethA | CMC5_045540 | CMC5_047140 | Strictosidine synthase. | FAD-containing monooxygenase EthA. | 0.414 |
AKT40814.1 | AKT36398.1 | CMC5_049700 | CMC5_005110 | Saccharopine dehydrogenase. | Dehydrogenase. | 0.592 |
AKT40814.1 | AKT38927.1 | CMC5_049700 | CMC5_030740 | Saccharopine dehydrogenase. | Uncharacterized protein. | 0.584 |
AKT40814.1 | AKT40401.1 | CMC5_049700 | CMC5_045540 | Saccharopine dehydrogenase. | Strictosidine synthase. | 0.692 |
AKT40814.1 | AKT40815.1 | CMC5_049700 | CMC5_049710 | Saccharopine dehydrogenase. | Uncharacterized protein; Belongs to the amidase family. | 0.787 |
AKT40814.1 | AKT40817.1 | CMC5_049700 | CMC5_049720 | Saccharopine dehydrogenase. | Uncharacterized protein. | 0.572 |
AKT40814.1 | AKT41063.1 | CMC5_049700 | CMC5_052220 | Saccharopine dehydrogenase. | NAD-dependent dehydratase. | 0.584 |
AKT40814.1 | AKT41383.1 | CMC5_049700 | CMC5_055830 | Saccharopine dehydrogenase. | Hydrolase. | 0.592 |
page 1 of 3