STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40873.1NUDIX hydrolase. (293 aa)    
Predicted Functional Partners:
AKT43779.1
Uncharacterized protein.
 
     0.816
AKT40874.1
Uncharacterized protein.
       0.709
AKT41063.1
NAD-dependent dehydratase.
 
     0.508
AKT40814.1
Saccharopine dehydrogenase.
  
     0.474
AKT43228.1
ATPase.
  
   
 0.461
AKT43005.1
Uncharacterized protein.
 
    0.458
AKT39550.1
Peptidase M17.
 
 
   0.457
AKT43118.1
Ethanolamine permease.
 
 
 0.451
AKT39477.1
Ferredoxin reductase.
 
 
 0.431
AKT42795.1
Uncharacterized protein.
 
    0.430
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.