Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT40908.1Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
AKT40907.1
Uncharacterized protein.
 
   
 0.955
AKT38679.1
Uncharacterized protein.
  
     0.518
AKT42262.1
Uncharacterized protein.
  
     0.511
AKT40909.1
Uncharacterized protein.
       0.469
capB
Capsule biosynthesis protein CapB.
  
     0.465
AKT41684.1
Oligosaccharyl transferase.
  
     0.452
AKT40911.1
Glycerol acyltransferase.
 
     0.445
AKT36746.1
Uncharacterized protein.
  
     0.443
AKT39289.1
phenylacetate--CoA ligase.
  
     0.426
AKT42002.1
Protein-tyrosine phosphatase.
  
     0.418
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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