STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40968.1Transglycosylase. (88 aa)    
Predicted Functional Partners:
AKT38368.1
Methyltransferase.
   
    0.595
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.511
AKT36673.1
Uncharacterized protein.
 
    0.508
csbD
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
  
  
 0.409
csbD-2
General stress protein CsbD; Belongs to the UPF0337 (CsbD) family.
  
  
 0.409
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.