STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT40999.1Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
AKT41647.1
Cytochrome c family protein.
 
 
 0.910
AKT38001.1
4Fe-4S ferredoxin.
  
 
 0.811
AKT42132.1
Uncharacterized protein.
  
 
 0.810
AKT43937.1
Uncharacterized protein.
  
 
 0.810
AKT43429.1
Uncharacterized protein.
 
 
 0.802
AKT42572.1
Uncharacterized protein.
  
     0.744
AKT36402.1
Uncharacterized protein.
  
     0.734
AKT39755.1
Uncharacterized protein.
  
     0.729
AKT38371.1
Uncharacterized protein.
  
     0.679
AKT43167.1
Uncharacterized protein.
  
     0.654
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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