STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41034.1TonB-dependent receptor. (1056 aa)    
Predicted Functional Partners:
tonB-2
Biopolymer transporter TonB.
 
 
 0.910
AKT43628.1
Uncharacterized protein.
 
 
 0.818
tonB-3
Biopolymer transporter TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.805
AKT41380.1
Uncharacterized protein.
 
  
 0.789
AKT41074.1
Serine/threonine protein kinase.
  
     0.767
AKT40543.1
Peptidase M19.
  
   
 0.762
AKT40120.1
Uncharacterized protein.
  
     0.757
AKT41566.1
Uncharacterized protein.
  
     0.742
AKT40466.1
Uncharacterized protein.
  
    0.734
AKT38448.1
Peptidase M10.
  
     0.724
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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